Preprints

[Link to Articles]

  1. Protein Dynamics Beyond Structure Prediction
    Juliette Griffié, Sviatlana Shashkova, Antonio Ciarlo, Sreekanth K. Manikandan, Claes Andréasson, Malin Bäckström, Tristan Bereau, Hjalmar Brismar, Carlos Bustamante, Marta Carroni, Roberto Covino, Andreas Dahlin, Sebastian Deindl, Lucie Delemotte, Arne Elofsson, John Eriksson, Giovanna Fragneto, Anders Gunnarsson, Per Hammarström, Caroline Ingre, Christian Kaiser, Petronella Kettunen, Mark C. Leake, Benjamin Loos, Anna Månberg, Antonia S. J. S. Mey, Richard Neutze, Thomas Nyström, Karl Palmås, Charley Schaefer, Markus J. Tamás, Nicola Ticozzi, Tomás S. Pilvelic, Jacopo Sacquegno, B.M. (Betty)Tijms, Gunnar von Heijne, Björn Wallner, Vitali Zhaunerchyk, Simon Olsson, Joana B. Pereira, Julia Fernandez-Rodriguez, Fredrik Westerlund, Giovanni Volpe
    arXiv: 2606.08647
  2. Technological Excellence Requires Human and Social Context
    Karl Palmås, Mats Benner, Monica Billger, Ben Clarke, Raimund Feifel, Julia Fernandez-Rodriguez, Anna Foka, Juliette Griffié, Claes Gustafsson, Kerstin Hamilton, Johan Holmén, Kristina Lindström, Tobias Olofsson, Joana B. Pereira, Marisa Ponti, Julia Ravanis, Sviatlana Shashkova, Emma Sparr, Pontus Strimling, Fredrik Höök, Giovanni Volpe
    arXiv: 2603.10653
  3. Inchworm-Inspired Soft Robot with Groove-Guided Locomotion
    Hari Prakash Thanabalan, Lars Bengtsson, Ugo Lafont, Giovanni Volpe
    arXiv: 2512.07813
  4. How Do Proteins Fold?
    Carlos Bustamante, Christian Kaiser, Erik Lindahl, Robert Sosa, Giovanni Volpe
    arXiv: 2510.27074
  5. From Spectra to Stress: Unsupervised Deep Learning for Plant Health Monitoring
    Anoop C. Patil, Benny Jian Rong Sng, Yu-Wei Chang, Joana B. Pereira, Chua Nam-Hai, Rajani Sarojam, Gajendra Pratap Singh, In-Cheol Jang, and Giovanni Volpe
    arXiv: 2507.15772
  6. BRAPH 2: a flexible, open-source, reproducible, community-oriented, easy-to-use framework for network analyses in neurosciences
    Yu-Wei Chang, Blanca Zufiria-Gerbolés, Pablo Emiliano Gómez-Ruiz, Anna Canal-Garcia, Hang Zhao, Mite Mijalkov, Joana Braga Pereira, Giovanni Volpe
    bioRxiv: 10.1101/2025.04.11.648455
  7. Global graph features unveiled by unsupervised geometric deep learning
    Mirja Granfors, Jesús Pineda, Blanca Zufiria Gerbolés, Joana B. Pereira, Carlo Manzo, Giovanni Volpe
    arXiv: 2503.05560
  8. Dynamic live/apoptotic cell assay using phase-contrast imaging and deep learning
    Zofia Korczak, Jesús Pineda, Saga Helgadottir, Benjamin Midtvedt, Mattias Goksör, Giovanni Volpe, Caroline B. Adiels
    bioRxiv: 10.1101/2022.07.18.500422
  9. AnDi: The Anomalous Diffusion Challenge
    Gorka Muñoz-Gil, Giovanni Volpe, Miguel Angel Garcia-March, Ralf Metzler, Maciej Lewenstein & Carlo Manzo
    arXiv: 2003.12036